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The anima tree will detect structures around it however the detection radius is set to 0 so unless its on top of the anima tree itself it won't interfere. Also the detection radius and bonus for any buildings like anima stones is also set to 0.
The idea of this is to improve compatibility. If i'm not removing anything but simply setting it to a point where it doesn't function another mod can come along and change it without the game throwing errors.